"BrainMaps.org is an interactive high-resolution digital brain atlas and virtual microscope that is based on scanned images of serial sections of both primate and non-primate brains and that is fully integrated with a high-speed database server for querying and retrieving data about brain structure and function over the internet"
http://brainmaps.org/index.php
It is still in development so it should get even better in the future!
If you like brains, see also: The Brain Museum
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